IREScentralIRESG001 · Type I
Rfam/literature IRESGRoute A · GraphClust de novoType IRfam: IRES_Picorna ↗12,639 members
Type I family anchored to Rfam IRES_Picorna (RF00229), produced via RouteA_graphclust_5p7.
Consensus structure
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
PX242059.1_5UTR_0 | Picornaviridae | Enterovirus | 660 | 823.3 | — |
HQ283668.1_5UTR_0 | Picornaviridae | Enterovirus | 648 | 671.3 | — |
MH648056.1_5UTR_0 | Picornaviridae | Enterovirus | 438 | 283.7 | — |
MG212482.1_5UTR_0 | Picornaviridae | Enterovirus | 742 | 915.5 | — |
MZ363437.1_5UTR_0 | Picornaviridae | Enterovirus | 515 | 362.2 | — |
OQ842440.1_5UTR_0 | Picornaviridae | Enterovirus | 655 | 510.9 | — |
PX227169.1_5UTR_0 | Picornaviridae | Enterovirus | 723 | 508 | — |
PP548263.1_5UTR_0 | Picornaviridae | Enterovirus | 743 | 539.8 | — |
Showing 8 sample rows of 12,639 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 12,639 members; the member table above shows only a sample. Dominant virus family: Picornaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
Median activity 0.38 across 375 members with experimental measurements.
Full release: per-member activity overlay on the consensus structure, restricted to the measured subset.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle