Release notes

Currently serving v0.3 (generated 2026-09-18):343 IRES families, 54,030 member sequencesplus 73,620 orphan (unassigned) sequences.

v0.32026-09-18current

Security pass ahead of public exposure: all data-driven legend and tooltip rendering (sequence atlas, taxonomy charts) now HTML-escapes upstream-derived strings, closing the stored-XSS path found in review
Bundle metadata note updated to match the pre-release status
No data changes: 343 IRESG families and 127,650 candidates carried over

First pre-release of the public-facing IREScentral site; version renamed from the internal 0.1.x series to v0.2-prerelease
Internal-preview warning banner removed; Help, About and Download pages cleaned of draft wording
No data changes: 343 IRESG families and 127,650 candidates carried over from 0.1.6

Family page consensus-structure layout rebuilt: slim source toolbar above equal-height Rfam-style cards (static RiboGraphViz + interactive forna side by side, auto-centred), collapsible sequence/dot-bracket block, R-scape covariation in a bounded card, taxonomy charts in three columns
Homepage interactive atlas restored above the representative families, defaulting to the all-sequences embedding
Atlas: new FACS activity colouring (five bins), family legend annotated with curated IRES types, orphan/unknown points drawn on the bottom layer
Representative family table on the homepage gained RiboGraphViz structure thumbnails

Database-first homepage: task search with examples, definition-list summary, browse index, representative family table and a static atlas snapshot (no content data changed)
Utility bar and release strip across the site; richer multi-column footer
Flatter scientific visual tokens (navy/teal/coral, smaller radii and shadows)
New HCV-IRES-inspired logo and favicon
Download page simplified to available files, planned release files and citation/license notes

Visual system refresh: unified design tokens, metric cards, page headers and line-icon set (no content data changed)
Homepage kept database-first: hero metrics, featured families, atlas and entry cards
Search page split into current family search and planned sequence-search slot
Download page now lists available preview files, full-release targets, schema example and local cmsearch pattern
Family pages link out to the matching Rfam record

Review round: paginated family table (20 per page) with type/route facets, shared by the Families and Search pages
Home hero redesigned around the representative IRESG001 structure; atlas lazy-loads below the fold
Accessibility and SEO pass: skip link, focus styles, aria-current navigation, canonical/OG tags, mobile menu
Median-length metadata restored for 334/343 families

Dual sequence atlas: IRESG-assigned-only and all-sequences (including orphans) t-SNE embeddings with switchable colour legends
Orphan (unassigned) sequences included in site counts and taxonomy
Taxonomy page: virus family/genus composition charts, host distribution and a browsable hierarchy
Virus host metadata added to family members
Forna interactive viewer switched to the official default colouring

First internal preview with real pipeline data: 343 IRESG families and 54,030 member sequences
Per-family consensus structures from up to four sources (R-scape+CaCoFold, R-scape, RNAfold MFE, RNAalifold no-gap)
Forna interactive structure viewer on family pages
RiboGraphViz consensus-structure thumbnails on the Families page