IREScentralIRESG146 · De novo family 146
GraphClust IRESGRoute A · GraphClust de novo24 members
De novo family 146 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
IMGVR_UViG_3300036163_000010 | Marnaviridae | nan | — | — | — |
Supergroup015--picorna_salt_marsh_SRR11828806_k141_76112_flag1_multi201_len10123_5UTR_0 | Marnaviridae | nan | 940 | 598.7 | — |
PP590326.1_5UTR_0 | Iflaviridae | Iflavirus | 751 | 8.9 | — |
Supergroup015--picorna_salt_marsh_SRR11829332_k141_39317_flag1_multi208_len10098_5UTR_0 | Marnaviridae | nan | 939 | 598.7 | — |
Supergroup015--picorna_salt_marsh_SRR11828456_k141_15462_flag1_multi20_len10101_5UTR_0 | Marnaviridae | nan | 940 | 598.7 | — |
Supergroup015--picorna_salt_marsh_SRR11829144_k141_48629_flag1_multi127_len10122_5UTR_0 | Marnaviridae | nan | 939 | 598.7 | — |
IMGVR_UViG_3300035611_000003 | Marnaviridae | nan | — | — | — |
IMGVR_UViG_3300036349_000168 | Marnaviridae | nan | — | — | — |
Showing 8 sample rows of 24 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 24 members; the member table above shows only a sample. Dominant virus family: Marnaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle