IREScentralIRESG153 · De novo family 153
GraphClust IRESGRoute A · GraphClust de novo21 members
De novo family 153 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup031--Clstr074_riverine_SRR7687266_k141_123366_flag1_multi19_len6881_5UTR_0 | nan | nan | 847 | 1000.3 | — |
Supergroup031--Clstr074_riverine_SRR7687207_k141_152012_flag1_multi32_len7012_5UTR_0 | nan | nan | 842 | 1000.3 | — |
ND_347909_5UTR_0 | nan | nan | 814 | 1000.3 | — |
ND_350269_5UTR_0 | nan | nan | 830 | 1000.3 | — |
ND_355273_5UTR_0 | nan | nan | 817 | 1000.3 | — |
Supergroup031--Clstr074_riverine_SRR7963561_k141_105975_flag1_multi75_len6913_5UTR_0 | nan | nan | 843 | 1000.3 | — |
Supergroup031--Clstr074_riverine_SRR7687205_k141_183634_flag1_multi125_len6972_5UTR_0 | nan | nan | 901 | 1000.3 | — |
Supergroup031--Clstr074_riverine_SRR7687280_k141_160157_flag1_multi44_len6875_5UTR_0 | nan | nan | 810 | 974.9 | — |
Showing 8 sample rows of 21 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 21 members; the member table above shows only a sample. Dominant virus family: nan. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle