IRESG199 · De novo family 199

GraphClust IRESGRoute A · GraphClust de novo60 members

De novo family 199 family, produced via RouteA_graphclust_5p7.

Consensus structure

Interactive · forna force-directed layout

loading interactive viewer…

interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre

Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.

Consensus sequence & dot-bracket

R-scape covariation plot of IRESG199 — Base pairs marked **green** covary significantly (E-value < 0.05). Click the image for full size. Shown for the R-scape-based sources only.

Members

IRES ID	Virus family	Virus genus	Length (nt)	CM score	Activity
`Supergroup015--picorna_freshwater_SRR12063622_k141_1143_flag1_multi13_len5510_5UTR_0`	Marnaviridae	Locarnavirus	790	3.3	—
`Supergroup015--picorna_freshwater_SRR2089054_k79_897_flag1_multi80_len5727_5UTR_0`	Marnaviridae	nan	726	24.3	—
`IMGVR_UViG_3300035577_001151`	nan	nan	—	—	—
`Supergroup015--picorna_wetland_SRR5864107_k141_51763_flag1_multi62_len8484_5UTR_0`	Marnaviridae	nan	878	968.3	—
`Supergroup015--picorna_estuary_SRR7086193_k141_14649_flag1_multi31_len8900_5UTR_0`	Marnaviridae	nan	802	14.4	—
`Supergroup015--picorna_wetland_SRR5213863_k141_40065_flag1_multi60_len8481_5UTR_0`	Marnaviridae	nan	875	968.3	—
`Supergroup015--picorna_wetland_SRR5213861_k141_15471_flag1_multi62_len8468_5UTR_0`	Marnaviridae	nan	885	968.3	—
`IMGVR_UViG_3300035575_000023`	Marnaviridae	nan	—	—	—

Showing 8 sample rows of 60 members; the full member table ships with a future release.

Taxonomy distribution

Virus family

Virus genus (top 12)

Virus host (top 12)

Taxonomy and host counts are aggregated from the full export metadata over all 60 members; the member table above shows only a sample. Dominant virus family: Marnaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".

Activity

No experimental activity data for members of this family.

Model & downloads

Consensus structure (PNG, RiboGraphViz)
Covariance model (final.cm) — available in the full bundle
Seed alignment (final.sto, Stockholm) — available in the full bundle
Member FASTA — available in the full bundle

Curation & provenance

Family ID: IRESG199
Evidence class: graphclust_supported_IRESG
Production route: Route A · GraphClust de novo (RouteA_graphclust_5p7)
Rfam anchor: none (de novo)
Data release: v0.3 (2026-09-18)