IREScentralIRESG206 · De novo family 206
GraphClust IRESGRoute A · GraphClust de novo10 members
De novo family 206 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: RNAfold MFE.
Consensus sequence & dot-bracket
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup015--picorna_wastewater_ERR3463888_k99_11967_flag1_multi15_len5779_5UTR_0 | nan | nan | 1000 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463890_k99_51238_flag1_multi10_len5807_5UTR_0 | nan | nan | 1014 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463895_k99_58502_flag1_multi25_len8913_5UTR_0 | nan | nan | 1015 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463887_k119_26197_flag1_multi16_len8872_5UTR_0 | nan | nan | 1026 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463883_k99_22642_flag1_multi11_len6473_5UTR_0 | Marnaviridae | nan | 1010 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463899_k99_34724_flag1_multi20_len8910_5UTR_0 | Marnaviridae | nan | 1012 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463885_k99_49681_flag1_multi20_len8906_5UTR_0 | Marnaviridae | nan | 1008 | 627 | — |
Supergroup015--picorna_wastewater_ERR3463893_k99_34774_flag1_multi19_len8886_5UTR_0 | nan | nan | 1022 | 627 | — |
Showing 8 sample rows of 10 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 10 members; the member table above shows only a sample. Dominant virus family: nan. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle