IREScentralIRESG208 · De novo family 208
GraphClust IRESGRoute A · GraphClust de novo31 members
De novo family 208 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
loading interactive viewer…
interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup021--Clstr250_riverine_SRR7687108_k141_18250_flag1_multi168_len6600_5UTR_0 | nan | nan | 792 | 252.4 | — |
Supergroup021--Clstr250_riverine_SRR7687107_k141_100014_flag1_multi242_len6614_5UTR_0 | nan | nan | 789 | 252.4 | — |
Supergroup021--Clstr250_riverine_SRR7963489_k141_169891_flag1_multi82_len4505_5UTR_0 | nan | nan | 913 | 626.1 | — |
IMGVR_UViG_3300025753_000005 | nan | nan | — | — | — |
Supergroup021--Clstr250_riverine_SRR7687091_k141_2462_flag1_multi25_len4488_5UTR_0 | nan | nan | 901 | 626.1 | — |
IMGVR_UViG_3300028108_000394 | nan | nan | — | — | — |
IMGVR_UViG_3300026568_000021 | nan | nan | — | — | — |
Supergroup021--Clstr250_riverine_SRR7687092_k141_142039_flag1_multi22_len4495_5UTR_0 | nan | nan | 713 | 252.4 | — |
Showing 8 sample rows of 31 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 31 members; the member table above shows only a sample. Dominant virus family: nan. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle