IRESG220 · De novo family 220

GraphClust IRESGRoute A · GraphClust de novo41 members

De novo family 220 family, produced via RouteA_graphclust_5p7.

Consensus structure

Interactive · forna force-directed layout

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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre

Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.

Consensus sequence & dot-bracket

R-scape covariation plot of IRESG220 — Base pairs marked **green** covary significantly (E-value < 0.05). Click the image for full size. Shown for the R-scape-based sources only.

Members

IRES ID	Virus family	Virus genus	Length (nt)	CM score	Activity
`Supergroup015--picorna_wetland_SRR5213865_k141_18883_flag1_multi12_len9602_5UTR_0`	Marnaviridae	nan	953	607.6	—
`Supergroup015--picorna_houxin_soil_S60-HZ_k141_115981_flag0_multi159_len6051_5UTR_0`	Marnaviridae	nan	961	325.5	—
`Supergroup015--picorna_salt_marsh_SRR11829261_k141_49076_flag1_multi11_len9970_5UTR_0`	nan	nan	881	168.6	—
`Supergroup015--picorna_estuary_SRR12391687_k141_41350_flag1_multi137_len9643_5UTR_0`	Marnaviridae	nan	974	614.2	—
`Supergroup015--picorna_aquatic_SRR3233270_k99_20662_flag1_multi103_len9554_5UTR_0`	Marnaviridae	nan	879	85.1	—
`Supergroup015--picorna_freshwater_sediment_SRR11011819_k141_124452_flag1_multi1470_len7104_5UTR_0`	nan	nan	971	223.3	—
`IMGVR_UViG_3300006372_000074`	Marnaviridae	nan	—	—	—
`MZ679210.1_5UTR_0`	Marnaviridae	nan	900	95.3	—

Showing 8 sample rows of 41 members; the full member table ships with a future release.

Taxonomy distribution

Virus family

Virus genus (top 12)

Virus host (top 12)

Taxonomy and host counts are aggregated from the full export metadata over all 41 members; the member table above shows only a sample. Dominant virus family: Marnaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".

Activity

No experimental activity data for members of this family.

Model & downloads

Consensus structure (PNG, RiboGraphViz)
Covariance model (final.cm) — available in the full bundle
Seed alignment (final.sto, Stockholm) — available in the full bundle
Member FASTA — available in the full bundle

Curation & provenance

Family ID: IRESG220
Evidence class: graphclust_supported_IRESG
Production route: Route A · GraphClust de novo (RouteA_graphclust_5p7)
Rfam anchor: none (de novo)
Data release: v0.3 (2026-09-18)