IREScentralIRESG222 · De novo family 222
GraphClust IRESGRoute A · GraphClust de novo291 members
De novo family 222 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup011--narna-levi_soil_SRR5212869_k141_10081_flag1_multi21_len4089_5UTR_0 | Mitoviridae | nan | 837 | 1007.6 | — |
IMGVR_UViG_3300010139_000073 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300022522_000060 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300047419_000148 | nan | nan | — | — | — |
IMGVR_UViG_3300031093_000482 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300010139_000005 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300010098_000046 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300003161_000077 | nan | nan | — | — | — |
Showing 8 sample rows of 291 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 291 members; the member table above shows only a sample. Dominant virus family: Mitoviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle