IREScentralIRESG232 · De novo family 232
GraphClust IRESGRoute A · GraphClust de novo30 members
De novo family 232 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup011--narna-levi_soil_SRR11565847_k141_25242_flag1_multi449_len3888_5UTR_0 | Mitoviridae | Duamitovirus | 1518 | 239.1 | — |
Supergroup011--narna-levi_soil_SRR5818823_k141_71545_flag1_multi13_len3451_5UTR_0 | Mitoviridae | nan | 1423 | 983.8 | — |
Supergroup011--narna-levi_soil_SRR11565848_k141_19540_flag1_multi331_len3903_5UTR_0 | Mitoviridae | Duamitovirus | 1540 | 239.1 | — |
Supergroup011--narna-levi_rhizosphere_SRR5413246_k141_157595_flag1_multi94_len3978_5UTR_0 | Mitoviridae | Duamitovirus | 1545 | 238 | — |
Supergroup011--narna-levi_soil_SRR5818379_k141_31603_flag1_multi12_len3426_5UTR_0 | Mitoviridae | nan | 1423 | 985.9 | — |
Supergroup011--narna-levi_soil_SRR5211369_k141_600_flag1_multi10_len3408_5UTR_0 | Mitoviridae | nan | 1420 | 983.8 | — |
Supergroup011--narna-levi_rhizosphere_SRR5413302_k141_143073_flag1_multi360_len3913_5UTR_0 | Mitoviridae | nan | 1485 | 232.3 | — |
Supergroup011--narna-levi_soil_SRR11678562_k141_65634_flag1_multi227_len3908_5UTR_0 | Mitoviridae | Duamitovirus | 1427 | 160.5 | — |
Showing 8 sample rows of 30 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 30 members; the member table above shows only a sample. Dominant virus family: Mitoviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle