IREScentralIRESG241 · De novo family 241
GraphClust IRESGRoute A · GraphClust de novo1,041 members
De novo family 241 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
PQ577606.1_5UTR_0 | Coronaviridae | Alphacoronavirus | 283 | 101.9 | — |
MN692789.1_5UTR_0 | Coronaviridae | Alphacoronavirus | 296 | 320.6 | — |
MT198679.1_5UTR_0 | Coronaviridae | Alphacoronavirus | 292 | 340 | — |
PP187314.1_5UTR_0 | Coronaviridae | Alphacoronavirus | 265 | 309.2 | — |
PP273183.1_5UTR_0 | Coronaviridae | nan | 280 | 101.9 | — |
NC_028752.1_5UTR_0 | Coronaviridae | Alphacoronavirus | 292 | 301.9 | — |
PQ226467.1_5UTR_0 | Coronaviridae | Alphacoronavirus | 259 | 309.2 | — |
OQ175069.1_5UTR_0 | Coronaviridae | nan | 272 | 84.3 | — |
Showing 8 sample rows of 1,041 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 1,041 members; the member table above shows only a sample. Dominant virus family: Coronaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle