IREScentralIRESG253 · De novo family 253
GraphClust IRESGRoute A · GraphClust de novo30 members
De novo family 253 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
loading interactive viewer…
interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
IMGVR_UViG_3300024861_000346 | Marnaviridae | nan | — | — | — |
Supergroup015--picorna_riverine_SRR7687110_k141_37986_flag1_multi49_len5803_5UTR_0 | Marnaviridae | Salisharnavirus | 1138 | 1021.7 | — |
IMGVR_UViG_3300028088_000002 | Marnaviridae | nan | — | — | — |
IMGVR_UViG_3300035589_000578 | Marnaviridae | nan | — | — | — |
IMGVR_UViG_3300025742_000033 | Marnaviridae | nan | — | — | — |
Supergroup015--picorna_riverine_SRR7687123_k141_51335_flag1_multi43_len6399_5UTR_0 | Marnaviridae | nan | 1132 | 1016.8 | — |
IMGVR_UViG_3300037763_000108 | Marnaviridae | nan | — | — | — |
IMGVR_UViG_3300025757_000048 | Marnaviridae | nan | — | — | — |
Showing 8 sample rows of 30 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 30 members; the member table above shows only a sample. Dominant virus family: Marnaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle