IREScentralIRESG261 · De novo family 261
GraphClust IRESGRoute A · GraphClust de novo11 members
De novo family 261 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: RNAfold MFE.
Consensus sequence & dot-bracket
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup015--picorna_seawater_SRR9108882_k141_207150_flag1_multi108_len8900_5UTR_0 | nan | nan | 448 | 549.4 | — |
Supergroup015--picorna_marine_SRR10450113_k119_4788_flag1_multi35_len8884_5UTR_0 | nan | nan | 432 | 542.3 | — |
Supergroup015--picorna_marine_SRR10450104_k119_99511_flag1_multi285_len8902_5UTR_0 | nan | nan | 434 | 549.4 | — |
IMGVR_UViG_3300009679_001262 | nan | nan | — | — | — |
MF189973.1_5UTR_0 | Dicistroviridae | nan | 523 | 77.8 | — |
Supergroup015--picorna_seawater_SRR9108864_k141_152566_flag1_multi129_len8878_5UTR_0 | nan | nan | 426 | 534.9 | — |
Supergroup015--picorna_seawater_SRR9108845_k141_533826_flag1_multi86_len6175_5UTR_0 | nan | nan | 436 | 549.4 | — |
Supergroup015--picorna_marine_SRR5131981_k141_2628_flag1_multi15_len6795_5UTR_0 | nan | nan | 423 | 530.6 | — |
Showing 8 sample rows of 11 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 11 members; the member table above shows only a sample. Dominant virus family: nan. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle