IREScentralIRESG268 · De novo family 268
GraphClust IRESGRoute A · GraphClust de novo53 members
De novo family 268 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
loading interactive viewer…
interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
IMGVR_UViG_3300006357_000045 | Marnaviridae | Locarnavirus | — | — | — |
MZ679238.1_5UTR_0 | Marnaviridae | Locarnavirus | 768 | 597.2 | — |
IMGVR_UViG_3300019198_000035 | Marnaviridae | Locarnavirus | — | — | — |
Supergroup015--picorna_marine_ERR3477396_k141_72650_flag1_multi16_len8731_5UTR_0 | Marnaviridae | Locarnavirus | 772 | 537.2 | — |
Supergroup015--picorna_estuary_SRR7085047_k141_107916_flag1_multi38_len8852_5UTR_0 | Marnaviridae | Locarnavirus | 795 | 874.4 | — |
IMGVR_UViG_3300036106_000021 | Marnaviridae | Locarnavirus | — | — | — |
IMGVR_UViG_3300006231_000452 | nan | nan | — | — | — |
IMGVR_UViG_3300035408_000002 | Marnaviridae | Locarnavirus | — | — | — |
Showing 8 sample rows of 53 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 53 members; the member table above shows only a sample. Dominant virus family: Marnaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle