IREScentralIRESG270 · De novo family 270
GraphClust IRESGRoute A · GraphClust de novo57 members
De novo family 270 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup011--narna-levi_soil_SRR5258561_k141_172127_flag1_multi416_len3829_5UTR_0 | Mitoviridae | Duamitovirus | 770 | 916.6 | — |
IMGVR_UViG_3300030903_000318 | Mitoviridae | nan | — | — | — |
Supergroup011--narna-levi_soil_SRR5258559_k141_152581_flag1_multi168_len3808_5UTR_0 | Mitoviridae | Duamitovirus | 768 | 927.3 | — |
Supergroup011--narna-levi_soil_SRR5252362_k141_17128_flag1_multi11_len2895_5UTR_0 | Mitoviridae | Duamitovirus | 745 | 908.9 | — |
Supergroup011--narna-levi_soil_SRR5260219_k141_9350_flag1_multi40_len3736_5UTR_0 | Mitoviridae | Duamitovirus | 707 | 830.7 | — |
Supergroup011--narna-levi_soil_SRR5252363_k141_25631_flag1_multi203_len3842_5UTR_0 | Mitoviridae | Duamitovirus | 770 | 920.1 | — |
IMGVR_UViG_3300003840_000043 | Mitoviridae | nan | — | — | — |
Supergroup011--narna-levi_soil_SRR5258659_k141_232695_flag1_multi21_len4388_5UTR_0 | Mitoviridae | nan | 763 | -0.5 | — |
Showing 8 sample rows of 57 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 57 members; the member table above shows only a sample. Dominant virus family: Mitoviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle