IREScentralIRESG279 · De novo family 279
GraphClust IRESGRoute A · GraphClust de novo384 members
De novo family 279 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
OR437293.1_5UTR_0 | Iflaviridae | Iflavirus | 1060 | 721.2 | — |
PV664075.1_5UTR_0 | Iflaviridae | Iflavirus | 1127 | 552.9 | — |
HM162354.1_5UTR_0 | Iflaviridae | Iflavirus | 1130 | 568.1 | — |
OR437283.1_5UTR_0 | Iflaviridae | Iflavirus | 1099 | 478.3 | — |
PP437923.1_5UTR_0 | Iflaviridae | Iflavirus | 1082 | 813.5 | — |
OR497385.1_5UTR_0 | Iflaviridae | Iflavirus | 1073 | 781.8 | — |
PV664166.1_5UTR_0 | Iflaviridae | Iflavirus | 1056 | 370.5 | — |
MW442722.1_5UTR_0 | Iflaviridae | Iflavirus | 1091 | 801.6 | — |
Showing 8 sample rows of 384 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 384 members; the member table above shows only a sample. Dominant virus family: Iflaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle