IREScentralIRESG293 · De novo family 293
GraphClust IRESGRoute A · GraphClust de novo11 members
De novo family 293 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
loading interactive viewer…
interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: RNAfold MFE.
Consensus sequence & dot-bracket
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup015--picorna_freshwater_SRR1211009_k99_2864_flag1_multi107_len9630_5UTR_0 | nan | nan | 1157 | 1002.2 | — |
IMGVR_UViG_3300009208_000001 | Dicistroviridae | nan | — | — | — |
Supergroup015--picorna_freshwater_SRR1210768_k119_36982_flag1_multi114_len9610_5UTR_0 | nan | nan | 1154 | 1002.2 | — |
IMGVR_UViG_3300008796_000001 | Dicistroviridae | nan | — | — | — |
Supergroup015--picorna_freshwater_SRR1210769_k119_18240_flag1_multi73_len9636_5UTR_0 | nan | nan | 1167 | 1002.2 | — |
IMGVR_UViG_3300008798_000001 | Dicistroviridae | nan | — | — | — |
Supergroup015--picorna_freshwater_SRR1210849_k99_47745_flag1_multi161_len9614_5UTR_0 | nan | nan | 1172 | 1000.8 | — |
IMGVR_UViG_3300008800_000001 | Dicistroviridae | nan | — | — | — |
Showing 8 sample rows of 11 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 11 members; the member table above shows only a sample. Dominant virus family: Dicistroviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle