IRESG296 · De novo family 296

GraphClust IRESGRoute A · GraphClust de novo678 members

De novo family 296 family, produced via RouteA_graphclust_5p7.

Consensus structure

Interactive · forna force-directed layout

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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre

Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.

Consensus sequence & dot-bracket

R-scape covariation plot of IRESG296 — Base pairs marked **green** covary significantly (E-value < 0.05). Click the image for full size. Shown for the R-scape-based sources only.

Members

IRES ID	Virus family	Virus genus	Length (nt)	CM score	Activity
`KC136209.1_5UTR_0`	Coronaviridae	Gammacoronavirus	525	559.2	—
`OR346994.1_5UTR_0`	Coronaviridae	Gammacoronavirus	520	243.8	—
`KX364296.1_5UTR_0`	Coronaviridae	Gammacoronavirus	525	554.5	—
`KX259249.1_5UTR_0`	Coronaviridae	Gammacoronavirus	525	554.7	—
`MN566147.1_5UTR_0`	Coronaviridae	Gammacoronavirus	528	621.6	—
`LC683780.1_5UTR_0`	Coronaviridae	Gammacoronavirus	529	607.8	—
`OM912682.1_5UTR_0`	Coronaviridae	Gammacoronavirus	535	656.3	—
`KX219799.1_5UTR_0`	Coronaviridae	Gammacoronavirus	525	563.5	—

Showing 8 sample rows of 678 members; the full member table ships with a future release.

Taxonomy distribution

Virus family

Virus genus (top 12)

Virus host (top 12)

Taxonomy and host counts are aggregated from the full export metadata over all 678 members; the member table above shows only a sample. Dominant virus family: Coronaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".

Activity

No experimental activity data for members of this family.

Model & downloads

Consensus structure (PNG, RiboGraphViz)
Covariance model (final.cm) — available in the full bundle
Seed alignment (final.sto, Stockholm) — available in the full bundle
Member FASTA — available in the full bundle

Curation & provenance

Family ID: IRESG296
Evidence class: graphclust_supported_IRESG
Production route: Route A · GraphClust de novo (RouteA_graphclust_5p7)
Rfam anchor: none (de novo)
Data release: v0.3 (2026-09-18)