IREScentralIRESG306 · De novo family 306
GraphClust IRESGRoute A · GraphClust de novo39 members
De novo family 306 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
Supergroup011--narna-levi_soil_SRR12334071_k141_116534_flag1_multi17_len3638_5UTR_0 | Mitoviridae | Duamitovirus | 742 | 24.3 | — |
Supergroup011--narna-levi_soil_SRR5211376_k141_40893_flag1_multi6_len2711_5UTR_0 | Mitoviridae | nan | 757 | 961.5 | — |
IMGVR_UViG_3300010117_000105 | nan | nan | — | — | — |
Supergroup011--narna-levi_soil_SRR5818309_k141_16071_flag1_multi9_len3658_5UTR_0 | Mitoviridae | nan | 762 | 965.3 | — |
IMGVR_UViG_3300043791_000151 | nan | nan | — | — | — |
IMGVR_UViG_3300012398_000146 | nan | nan | — | — | — |
IMGVR_UViG_3300010061_000131 | nan | nan | — | — | — |
Supergroup011--narna-levi_rhizosphere_SRR8098556_k141_414658_flag1_multi491_len3659_5UTR_0 | Mitoviridae | Duamitovirus | 642 | 5.8 | — |
Showing 8 sample rows of 39 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 39 members; the member table above shows only a sample. Dominant virus family: Mitoviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle