IREScentralIRESG312 · De novo family 312
GraphClust IRESGRoute A · GraphClust de novo173 members
De novo family 312 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
MF598709.1_5UTR_0 | Coronaviridae | Betacoronavirus | 278 | 333 | — |
OQ175301.1_5UTR_0 | Coronaviridae | nan | 259 | 137.2 | — |
MG923473.1_5UTR_0 | Coronaviridae | Betacoronavirus | 260 | 316.3 | — |
OQ175284.1_5UTR_0 | Coronaviridae | nan | 260 | 145.6 | — |
KX108942.1_5UTR_0 | Coronaviridae | Betacoronavirus | 259 | 321.5 | — |
KT374057.1_5UTR_0 | Coronaviridae | Betacoronavirus | 262 | 330.4 | — |
OP866278.1_5UTR_0 | Coronaviridae | Betacoronavirus | 279 | 325 | — |
MG366483.1_5UTR_0 | Coronaviridae | Betacoronavirus | 256 | 306 | — |
Showing 8 sample rows of 173 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 173 members; the member table above shows only a sample. Dominant virus family: Coronaviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle