IREScentralIRESG313 · De novo family 313
GraphClust IRESGRoute A · GraphClust de novo15 members
De novo family 313 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
loading interactive viewer…
interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: RNAfold MFE.
Consensus sequence & dot-bracket
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
IMGVR_UViG_3300012734_000034 | nan | nan | — | — | — |
IMGVR_UViG_3300012712_000029 | nan | nan | — | — | — |
IMGVR_UViG_3300012729_000413 | nan | nan | — | — | — |
IMGVR_UViG_3300016697_000002 | nan | nan | — | — | — |
IMGVR_UViG_3300012720_000453 | nan | nan | — | — | — |
Supergroup018--tombus-noda_lake_water_SRR5834616_k141_41904_flag1_multi7_len3520_5UTR_0 | Nodaviridae | nan | 345 | 436.2 | — |
Supergroup018--tombus-noda_lake_water_SRR6823694_k141_49709_flag1_multi8_len3956_5UTR_0 | Nodaviridae | nan | 375 | 450.8 | — |
IMGVR_UViG_3300012708_000048 | nan | nan | — | — | — |
Showing 8 sample rows of 15 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 15 members; the member table above shows only a sample. Dominant virus family: nan. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle