IREScentralIRESG315 · De novo family 315
GraphClust IRESGRoute A · GraphClust de novo34 members
De novo family 315 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
IMGVR_UViG_3300009579_000601 | Marnaviridae | nan | — | — | — |
Supergroup015--picorna_wetland_SRR5213862_k141_2687_flag1_multi50_len9098_5UTR_0 | Marnaviridae | nan | 741 | 747.9 | — |
IMGVR_UViG_3300037614_000120 | nan | nan | — | — | — |
IMGVR_UViG_3300009580_000220 | Marnaviridae | nan | — | — | — |
IMGVR_UViG_3300038158_000142 | nan | nan | — | — | — |
IMGVR_UViG_3300037649_000212 | nan | nan | — | — | — |
IMGVR_UViG_3300038168_000254 | nan | nan | — | — | — |
Supergroup015--picorna_wetland_SRR5213861_k141_46034_flag1_multi241_len9136_5UTR_0 | Marnaviridae | nan | 777 | 799.2 | — |
Showing 8 sample rows of 34 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 34 members; the member table above shows only a sample. Dominant virus family: nan. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle