IREScentralIRESG334 · De novo family 334
GraphClust IRESGRoute A · GraphClust de novo54 members
De novo family 334 family, produced via RouteA_graphclust_5p7.
Consensus structure
Interactive · forna force-directed layout
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interactive force layout — drag nucleotides to rearrange · scroll to zoom · press “c” to centre
Interactive forna force-directed layout with stock colouring and parameters, rendered in the browser from the consensus sequence and dot-bracket string. Default source: R-scape + CaCoFold.
Consensus sequence & dot-bracket
R-scape covariation · R-scape + CaCoFold (R2R layout)
Members
| IRES ID | Virus family | Virus genus | Length (nt) | CM score | Activity |
|---|---|---|---|---|---|
IMGVR_UViG_3300010098_000036 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300012378_000089 | Mitoviridae | nan | — | — | — |
Supergroup011--narna-levi_soil_SRR5212079_k141_17066_flag1_multi15_len2344_5UTR_0 | Mitoviridae | Unuamitovirus | 415 | 513.6 | — |
Supergroup011--narna-levi_soil_SRR10904364_k141_100674_flag1_multi27_len2761_5UTR_0 | Mitoviridae | nan | 428 | 348.5 | — |
IMGVR_UViG_3300004798_000005 | Mitoviridae | nan | — | — | — |
IMGVR_UViG_3300012404_000079 | Mitoviridae | nan | — | — | — |
Supergroup011--narna-levi_soil_SRR5818290_k141_29410_flag1_multi42_len2561_5UTR_0 | Mitoviridae | Unuamitovirus | 421 | 523.3 | — |
IMGVR_UViG_3300010126_000072 | Mitoviridae | nan | — | — | — |
Showing 8 sample rows of 54 members; the full member table ships with a future release.
Taxonomy distribution
Virus family
Virus genus (top 12)
Virus host (top 12)
Taxonomy and host counts are aggregated from the full export metadata over all 54 members; the member table above shows only a sample. Dominant virus family: Mitoviridae. Host species are annotated only for NCBI-sourced genomes; members from metagenomic sources count as "unknown".
Activity
No experimental activity data for members of this family.
Model & downloads
- Consensus structure (PNG, RiboGraphViz)
- Covariance model (
final.cm) — available in the full bundle - Seed alignment (
final.sto, Stockholm) — available in the full bundle - Member FASTA — available in the full bundle